Clouds, transparent entities, and particles render behind water when looking through transparent blocks

When looking through transparent blocks (such as stained glass), then clouds, transparent entities, and particles in front of water are rendered behind the water instead.

This happens despite using Fabulous! graphics.

To reproduce

Clouds

1. Build a water pool on the ground
2. Fly above the clouds
3. Place a platform of stained glass
4. Look through the stained glass through the clouds onto the ground
   → The cloud doesn't render where the transparent blocks on the ground are

Transparent entities

1. Build a water pool
2. Throw a slime block item at the edge of the water pool
3. Alternatively, summon an invisible armor stand and go into spectator mode
4. Look at that item/entity through stained glass
   → The item/entity is rendered behind the water

Particles

1. Build a water pool
2. Place a campfire at the edge of the pool
3. Throw a lingering potion
4. Look at the campfire and particles through stained glass
   → The particles are rendered behind the water